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imzml format  (Bruker Corporation)


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    Structured Review

    Bruker Corporation imzml format
    Imzml Format, supplied by Bruker Corporation, used in various techniques. Bioz Stars score: 97/100, based on 833 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/imzml+format/bio_rxiv__2025__02__12__637857-363-6-15
    Average 97 stars, based on 833 article reviews
    imzml format - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    other:

    Article Title: Differently increased volumes of multiple brain areas in Npc1 mutant mice following various drug treatments
    Article Snippet: First, raw data acquired with a MALDI-LTQ-Orbitrap XL instrument (Thermo) were converted into the public imzML format suitable for SCiLS lab 2018b (Bruker, Bremen, Germany) and normalized using the total ion count (TIC).

    Software:

    Article Title: Spatial lipidomics of coronary atherosclerotic plaque development in a familial hypercholesterolemia swine model
    Article Snippet: .. Data were exported in imzML format using SCiLS Lab software (v2016b, Bruker Daltonics) for further processing. .. We processed the MALDI-FTICR-MSI data using a custom MATLABTM 2017a (The Mathworks, Inc) data-processing pipeline ( ) in combination with mMass software , utilizing a similar process as for MALDI-TOF-MSI data.

    Article Title: rMSIannotation: A peak annotation tool for mass spectrometry imaging based on the analysis of isotopic intensity ratios.
    Article Snippet: .. The raw data was exported to imzML format using Bruker FlexImaging software and the dataset was then processed using the rMSIproc processing workflow [22]. ..

    Article Title: Spatial Lipidomics of Coronary Atherosclerotic Plaque Development in a Familial Hypercholesterolemia Swine Model.
    Article Snippet: .. Data were exported in imzML format using SCiLS Lab software (v2016b, Bruker Daltonics) for further processing. .. We processed the MALDI-FTICR-MSI data using a custom MATLABTM 2017a (The Mathworks, Jo urn al Pr -pr oo f 7 Inc., Natick, Massachusetts, USA) data-processing pipeline (19) in combination with mMass software (20), utilizing a similar process as for MALDI-TOF-MSI data.

    Article Title: Identifying lipid traces of atherogenic mechanisms in human carotid plaque.
    Article Snippet: .. Data were converted to imzML format using SCiLS Lab software (v2016b, Bruker Daltonics) for further processing. .. FTICR data was processed with an in-house developed data processing pipeline [21] in MATLABTM 2017a (The Mathworks, Inc., Natick, Massachusetts, USA) in combination with mMass software [22] for peak picking and isotope removal.

    Article Title: A pathogenic subpopulation of human glioma associated macrophages linked to glioma progression
    Article Snippet: .. Data was visualized and exported to imzml format using SCiLS Lab software (version 2023a core, Bruker Daltonics, USA). ..



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